Poster presentation

2016

2016/10/18-22 Fine-scale genetic diversity of Japanese population, Yosuke Kawai, ASHG 2016 Annual Meeting, 2016/10/19, Vancouver, Canada, Vancouver Convention Centre, 1159/W, Y. Kawai, K. Misawa, T. Mimori, K. Kojima, F. Katsuoka, M. Yamamoto, J. Yasuda, M. Nagasaki

2016/10/18-22 Phasing variants of duplicated genes using whole genome sequencing data, Takahiro Mimori, ASHG 2016 Annual Meeting, 2016/10/19, Vancouver, Canada Vancouver Convention Centre, 1855/W, Takahiro Mimori, Naoki Nariai, Kaname Kojima, Yukuto Sato, Yosuke Kawai, Yumi Yamaguchi-Kabata, Masao Nagasaki

2016/10/18-22 Whole genome reference panel of two thousand Japanese individuals andbioinformatics in ToMMo, Masao Nagasaki, ASHG 2016 Annual Meeting, 2016/10/21, Vancouver, Canada Vancouver Convention Centre, 1791/F, Masao Nagasaki, Yosuke Kawai, Kaname Kojima, Takahiro Mimori, Kazuharu Misawa, Tomoko F Shibata, Yumi Yamaguchi-Kabata, Yukuto Sato, Riu Yamashita, Nobuo Fuse, Shin Ito, Inaho Danjoh, Sakae Saito, Fumiki Katsuoka, Jun Yasuda, Masayuki Yamamoto, ToMMo Japanese Reference Panel Project

2016/10/18-22 Association study of rare variants on serum urate level by using whole genome cohort study samples, Kazuharu Misawa, ASHG 2016 Annual Meeting, 2016/10/21, Vancouver, Canada Vancouver Convention Centre, 339/F, Kazuharu Misawa, Takanori Hasegawa, Kaname Kojima, Atsushi Hozawa, Takako Takai-Igarashi, Naoko Minegishi, Jun Yasuda, Soichi Ogishima, Shigeo Kure, Kengo Kinoshita, Masayuki Yamamoto, and Masao Nagasaki

2016/10/18-22 Towards an innovative early prediction of pregnancy-related diseases with integrated analysis of daily life log records and multi-omics data Takafumi Yamaguchi, ASHG 2016 Annual Meeting, 2016/10/18, Vancouver, Canada Vancouver Convention Centre, 1581/F, T. Yamauchi, D. Ochi, Y. Harada, R. Yamashita, T. Takai, S. Ogishima, N. Minegishi, O. Tanabe, S. Kuriyama, N. Fuse, N. Yaegashi, S. Hiyama, M. Nagasaki, J. Sugawara, Maternity-log Project Team

2016/09/27 Exploratory Study of Pregnancy Diseases by Integrated Analysis of Healthcare Data and Multi-omics Data , Harada Yuki, The 89th Annual Meeting of the Japanese Biochemical Society Secretariat, Sendai International Center / Kawauchi Campus, Tohoku University. Harada Yuki, Daisuke Ochi, Takafumi Yamauchi, Riu Yamashita, Satoshi Hiyama, Masao Nagasaki, Junichi Sugawara, Maternity-log Project, 16/9/25-27

2016/6/3-5 COL3A1 に新規の遺伝子変異が見つかった血管型EhlersDanlos syndrome の1 例, Kosuke Shido, The 115th Annual Meeting of the Japanese Dermatological Association, 2016/6/3-5, The 115th Annual Meeting of the Japanese Dermatological Association, Kyoto, P8-13, Kosuke Shido,Katsuko Kikuchi,Masayuki Asano,吉田幸代,Atsushi Hatamochi,Setsuya Aiba

2016/5/23 Two thousand Japanese whole genome reference panel in Japan and Bioinformatics, Masao Nagasaki, The 49th Congress of the European Society of Human Genetics(ESHG 2016), 2016/5/21-24, Pompeu Fabra University, Barcelona, Spain, Masao Nagasaki, Yosuke Kawai, Kaname Kojima, Takahiro Mimori, Kazuharu Misawa, Tomoko Shibata, Yumi Yamaguchi-Kabata, Yukuto Sato, Riu Yamashita, Nobuo Fuse, Shin Ito, Naoki Nariai, Yoko Kuroki, Inaho Danjoh, Sakae Saito, Fumiki Katsuoka, Jun Yasuda, Masayuki Yamamoto, ToMMo Japanese Reference Panel Project

2016/5/23 Improved imputation accuracy with population-specific SNP array and reference panel in Japanese population, Yosuke Kawai, The 49th Congress of the European Society of Human Genetics(ESHG 2016), 2016/5/21-24, Pompeu Fabra University, Barcelona, Spain, Yosuke Kawai, Takahiro Mimori, Kaname Kojima, Fumiki Katsuoka, Jun Yasuda, Masayuki. Yamamoto, Masao. Nagasaki

2016/4/6 Rare variant discovery by deep whole-genome sequencing of thousands Japanese individuals and bioinformatics, Masao Nagasaki, Yosuke Kawai, Kaname Kojima, Takahiro Mimori, Yumi Yamaguchi, Tomoko Shibata, Kazuharu Misawa, Yukuto Sato, Inaho Danjo, Sakae Saito, Shin Ito, Nobuo Fuse, Kengo Kinoshita, Shigeo Kure, Nobuo Yaegashi, Fumiki Katsuoka, Jun Yasuda, Masayuki Yamamoto, ToMMo Japanese Reference Panel Project, The 13th International Congress of Human Genetics, 2016/4/3-7, Kyoto International Conference Center, Kyoto, Wed(4)-P-5

2016/4/5 Improved imputation accuracy using populationspecific SNP array and haplotype reference panel, Yosuke Kawai, Takahiro MImori, Kaname Kojima, Naoki Nariai, Kazuharu Misawa, Yumi Yamaguchi, Yukuto Sato, Inaho Danjo, Rumiko Saito, Fumiki Katsuoka, Jun Yasuda, Masayuki Yamamoto, Masao Nagasaki, The 13th International Congress of Human Genetics, 2016/4/3-7, Kyoto International Conference Center, Kyoto, Tue(3)-P-88

2016/4/4 Identifying sequence differences among copy number variants from sequencing data, Takahiro Momori, Naoki Nariai, Kaname Kojima, Yukuto Sato, Yosuke Kawai, Yumi Yamaguchi, Masao Nagasaki, The 13th International Congress of Human Genetics, 2016/4/3-7, Kyoto International Conference Center, Kyoto, Mon(2)-P-113

2016/4/4 PAFFT: A new homology search algorithm for third-generation sequencers, Kazuharu Misawa, Ryo Ootsuki, The 13th International Congress of Human Genetics, 2016/4/3-7, Kyoto International Conference Center, Kyoto, Mon(2)-P-129,

2015

2015/10/7 Whole Genome Reference Panel of One Thousand Japanese Individuals and Bioinformatics in ToMMo, Masao Nagasaki, American Society of Human Genetics (ASHG) 65th Annual Meeting, 2015/10/6-10/10 11:45am-12:45pm, Baltimore Convention Center, Baltimore, Maryland, USA

2015/10/7 11:45am-12:45pm An approach combining the construction of haplotype collection and the design of population-optimized SNP array on the large-scale whole genome-sequencing project in Japan, Yosuke Kawai, American Society of Human Genetics (ASHG) 65th Annual Meeting, 2015/10/6-10/10, Baltimore Convention Center, Baltimore, Maryland, USA, Y. Kawai, T. Mimori, K.Kojima, N.Nariai, I. Danjoh, R.Sato, M.Yamamoto, M.Nagasaki

2015/10/7 10:45am-11:45am coalescentSTR: a statistical approach for short tandem repeat number estimation based on coalescent theory from high-throughput sequencing data, Kaname Kojima, American Society of Human Genetics (ASHG) 65th Annual Meeting, 2015/10/6-10/10, Baltimore Convention Center, Baltimore, Maryland, USA, K.Kojima, Y.Kawai. N.Nariai, T. Hasegawa, M. Nagasaki

2015/10/7 12:00pm-1:00pm Whole-genome reference panel of Tohoku Medical Megabank Organization (ToMMo) and variant annotations, Yumi Yamaguchi, American Society of Human Genetics (ASHG) 65th Annual Meeting, 2015/10/6-10/10, Baltimore Convention Center, Baltimore, Maryland, USA, Y. Yamaguchi, N. Nariai, Y. Kawai, Y. Sato, K. Kojima, M. Tateno, F. Katsuoka, J. Yasuda, M. Yamamoto, M. Nagasaki

2015/10/7 12:00pm-1:00pm CNValloc: a Bayesian approach for identifying copy unit alleles of CNVs from population-scale high-throughput sequencing data, Takahiro MImori, American Society of Human Genetics (ASHG) 65th Annual Meeting, 2015/10/6-10/10, Baltimore Convention Center, Baltimore, Maryland, USA, T. Mimori, N. Nariai, K. Kojima, Y. Sato, Y. Kawai, Y. Yamaguchi, M. Nagasaki

2015/10/7 6:00pm-7:00pm Distribution of unique sequences in the human genome, Kazuharu Misawa, American Society of Human Genetics (ASHG) 65th Annual Meeting, 2015/10/6-10/10, Baltimore Convention Center, Baltimore, Maryland, USA

2015/03/07 11:00-11:45 メタゲノム解析における歯垢試料の影響の評価指標について, Natsuko Shinozaki, 9th Annual Meeting of the Society of Genome Microbiology, Japan, 2015/03/06-08, KOBE University Centennial Hall, Natsuko Shinozaki, Junnya Yamagishi, Yukuto Sato, Masao Nagasaki, Akito Tsuboi, Riu Yamashita

2015/03/08 1:10pm-1:55pm , ヒト口腔細菌叢の日内変動性, Yukuto Sato,  9th Annual Meeting of the Society of Genome Microbiology, Japan, 2015/03/06-08, KOBE University Centennial Hall, Yukuto Sato, Junya Yamagishi, Riu Yamashita, Natsuko Shinozaki, Masao Nagasaki, Akito Tsuboi

2015/03/08 1:10pm-1:55pm口腔細菌叢メタゲノム解析における DNA 抽出方法の検討, Junya Yamagishi, 9th Annual Meeting of the Society of Genome Microbiology, Japan,  2015/03/06-08, KOBE University Centennial Hall, Junya Yamagishi, Yukuto Sato, Riu Yamashita, Natsuko Shinozaki, Masao Nagasaki, Akito Tsuboi

2014

2014/10/02 Statistical modeling of multi-mapped reads for high-throughput sequencing data analysis, Naoki Nariai, Japanese Society of Bioinformatics (JSBi), 2014/10/02-04, Sendai international center, Sendai, Miyagi, A-26, Naoki Nariai, Kaname Kojima, Takahiro Mimori, Yosuke Kawai, Yukuto Sato, Yumi Yamaguchi-Kabata, Masao Nagasaki

2014/10/02 iJGVD: Integrative Japanese Genome Variation Database from the cohort study of Tohoku Medical Megabank Organization (ToMMo), Yumi Yamaguchi-Kabata,  Japanese Society of Bioinformatics (JSBi), 2014/10/02-04,  Sendai international center, Sendai, Miyagi, B-07, Yumi Yamaguchi-Kabata, Naoki Nariai, Kaname Kojima, Yosuke Kawai, Yukuto Sato, Takahiro Mimori, Yoko Kuroki, Fumiki Katsuoka, Jun Yasuda, Masayuki Yamamoto, Masao Nagasaki

2014/10/02 Performance evaluation on haplotype phasing by using next generation sequencing data, Kaname Kojima, Japanese Society of Bioinformatics (JSBi),  2014/10/02-04, Sendai international center, Sendai, Miyagi, B-08, Kaname Kojima, Naoki Nariai, Yosuke Kawai, Takahiro Mimori, Yumi Yamaguchi-Kabata, Yukuto Sato, Masao Nagasaki

2014/10/02 SUGAR: graphical user interface-based high-resolution data cleaning for ultra-high-throughput sequencing data, Yukuto Sato, Japanese Society of Bioinformatics (JSBi), 2014/10/02-04, Sendai international center, Sendai, Miyagi, B-10, Yukuto Sato, Kaname Kojima, Naoki Nariai, Yumi Yamaguchi-Kabata, Yosuke Kawai, Masao Nagasaki,

2014/3/7 12:30 – 2014/3/9 11:50 歯垢検体の保存温度および保存期間による細菌叢への影響, 篠﨑夏子, 山岸潤也, 佐藤 行人, 山下 理宇, 山田拓司, 長﨑正朗, 坪井明人, 第8回日本ゲノム微生物学会年会, 2014/03/7-9,  東京農業大学 世田谷キャンパス,

2014/0218 9:37-9:50 歯垢試料の保存温度および保存期間による細菌叢への影響, 篠﨑夏子, 山岸 潤也, 佐藤行人, 山下理宇, 山田拓司, 長﨑正朗, 坪井明人, 生命情報若手の会,第5回研究会, 2014/02/18, 東京大学, 検見川セミナーハウス,

2013

2013/12/16-18 Comparative assessment of computational methods for quantifying mammalian transcript isoforms from RNA-Seq data , Naoki Nariai, Osamu Hirose, Kaname Kojima, Kazuko Ueno and Masao Nagasaki, Genome Informatics Workshop (GIW) 2013, Matrix Biopolis, National University of Singapore, Singapore

2013/12/16-18 Thousands Japanese whole genome sequencing and bioinformatics at Tohoku Medical Megabank Organization, Masao Nagasaki, Naoki Nariai, Kaname Kojima, Yumi Yamaguchi, Yukuto Sato, Riu Yamashita, Junya Yamagishi, Ikuko Motoike, Matsuyuki Shirota, Kengo Kinoshita, Jun Yasuda, Fukumi Katsuoka and Masayuki Yamamoto, Genome Informatics Workshop (GIW) 2013, Matrix Biopolis, National University of Singapore, Singapore

2013/12/16-18 Performance evaluation of variant calling methods with or without pedigree information, Kaname Kojima, Naoki Nariai, Takahiro Mimori, Mamoru Takahashi, Yumi Yamaguchi-Kabata, Yukuto Sato and Masao Nagasaki, Genome Informatics Workshop (GIW) 2013, Matrix Biopolis, National University of Singapore, Singapore

2013/10/25 (10:30-11:30) Bioinformatics and Data Management of High Throughput Sequencing Data from Prospective Cohort Study at Tohoku Medical Megabank Project. U.S.A (Boston, Seaport Hotel), 1493F , M. Nagasaki, N. Nariai, K. Kojima, Y. Yamaguchi, I. Sato, J. Yasuda, O. Tanabe, N. Fuse, K. Kengo, R. Yamashita, J. Yamagishi, I. Danjo, M. Matsumoto, K. Igarashi, K. Nakayama, F. Katsuoka, S. Saito, I. Motoike, N. Ishida, M. Shirota, M. Yamamoto, The American Society of Human Genetics (ASHG) 2013, 2013/10/22-26 Boston Convention & Exhibition Center, USA URL

2013/10/25 (10:30-11:30) Transcript isoform abundance estimation method with gapped alignment of RNA-seq data by variational Bayesian inference, 1494W,  N. Nariai, O. Hirose, K. Kojima, M. Nagasaki, The American Society of Human Genetics (ASHG) 2013, 2013/10/22-26, Boston Convention & Exhibition Center, USA

2013/10/22-26 Fast and high-resolution evaluation tool ofIllumina high-throughput data considering spatialorganization of the sequencing clusters, 1502F, Y. Sato, K.Kojima, N. Nariai, Y. Yamaguchi-Kabata, M. Nagasaki, The American Society of Human Genetics (ASHG) 2013, Boston Convention & Exhibition Center, USA

2013/10/22-26 A statistical approach for variant calling using pedigree information and phase informative reads. 1866 T, K. Kojima, N. Nariai, T. Mimori, M. Takahashi, Y. Yamaguchi- Kabata, Y. Sato, M. Nagasaki, The American Society of Human Genetics (ASHG) 2013, Boston Convention & Exhibition Center, USA

2013/9/29-31 Data Management and Bioinformatics of High Throughput Sequencing Data from Prospective Cohort Study at Tohoku Medical Megabank, Nagasaki Masao, Nariai Naoki, Kojima Kaname, Yamaguchi Yumi, Sato Yukuto, Yamashita Riu, Yamagishi Junya, Motoike Ikuko, Shirota Matsuyuki, Kinoshita Kengo, Yasuda Jun, Katsuoka Fukumi and Yamamoto Masayuki, P3, Japanese Society of Bioinformatics (JSBi), タワーホール舟堀 東京

2013/9/29-31 A critical assessment of SV calling methods from high-coverage sequencing data, Takahiro Mimori, Naoki Nariai, Kaname Kojima, Mamoru, Takahashi, Akira Ono, Yukuto Sato, Yumi Yamaguchi-Kabata and Masao Nagasaki, P11, Japanese Society of Bioinformatics (JSBi), タワーホール舟堀 東京

2013/9/29-31 Pedigree Caller: a statistical variant calling approach using phase informative reads and pedigree information, Kaname Kojima, Naoki Nariai, Takahiro Mimori, Mamoru Takahashi, Yumi Yamaguchi-Kabata, Yukuto Sato and Masao Nagasaki, P16, Japanese Society of Bioinformatics (JSBi), タワーホール舟堀 東京

2013/9/29-31 TIGAR: transcript isoform abundance estimation method with gapped alignment of RNA-Seq data by variational Bayesian inference, Naoki Nariai, Osamu Hirose, Kaname Kojima and Masao Nagasaki, P38, Japanese Society of Bioinformatics (JSBi), タワーホール舟堀 東京

2013/7/21-23 A statistical variant calling approach using pedigree information, Kaname Kojima, Naoki Nariai, Masao Nagasaki, 21st Annual International Conference on Intelligent Systems for Molecular Biology & 12th European Conference on Computational Biology (ISMB&ECCB), Messe Berlin (ICC Berlin) Germany

2013/7/21-23 Data Management and Bioinformatics of High Throughput Sequencing Data from Prospective Cohort Study at Tohoku Medical Megabank Project, Masao Nagasaki, Naoki Nariai, Kaname Kojima, Yumi Yamaguchi, Yukuto Sato, Riu Yamashita, Junya Yamagishi, Ikuko Motoike, Matsuyuki Shirota, Kengo Kinoshita, Jun Yasuda, Osamu Tanabe, Nobuo Fuse, Kazuhiko Igarashi, Keiko Nakayama, Fukumi Katsuoka, Masayuki Yamamoto, 21st Annual International Conference on Intelligent Systems for Molecular Biology & 12th European Conference on Computational Biology (ISMB&ECCB), Messe Berlin (ICC Berlin) Germany

2013/7/21-23 TIGAR: transcript isoform abundance estimation method with gapped alignment of RNA-Seq data by variational Bayesian inference, Naoki Nariai, Osamu Hirose, Kaname Kojima, Masao Nagasaki, 21st Annual International Conference on Intelligent Systems for Molecular Biology & 12th European Conference on Computational Biology (ISMB&ECCB), Messe Berlin (ICC Berlin) Germany

2012

2011

2011/5/31-6/1 オーダメード解析プラットフォーム:XiPとセルイラストレータオンライン 東大医科研 東京

2011年以降のみ掲載

その他ホスト

-2011/9/26 16:00-17:30 GCOE Program Seminar (Global Education Seminar) MIT Department of Biology, Alexander Rich Lab; Harvard Medical School, George Church Lab (USA) Title: Art, Genetics and Systems Biology Speaker: Joe Davis